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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G POLR2F chr22:38348614-38437922:+ 0.49 7.72 6.78E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G POLR3H chr22:41921808-41940610:- 0.78 9.82 7.44E-21 Box Plot
THCA rs9621609 chr22:33347552 A/G PPARA chr22:46546424-46639653:+ 0.49 7.26 1.62E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G PPIL2 chr22:22020298-22054304:+ 0.74 9.41 2.09E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G RABL2B chr22:51205929-51222091:- 0.56 6.84 2.38E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G RANBP1 chr22:20103461-20114880:+ 0.46 6.04 3.17E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G RANGAP1 chr22:41641615-41682255:- 0.44 6.07 2.6E-9 Box Plot
THCA rs9621609 chr22:33347552 A/G RBM9 chr22:36134784-36424585:- 0.42 6.71 5.41E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G RBX1 chr22:41347351-41369313:+ 0.51 8.66 7.16E-17 Box Plot
THCA rs9621609 chr22:33347552 A/G RHBDD3 chr22:29655841-29664198:- 0.6 8.72 4.5E-17 Box Plot
THCA rs9621609 chr22:33347552 A/G RNF185 chr22:31556169-31603005:+ 0.74 9.1 2.39E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G RNF215 chr22:30764800-30817760:- 0.67 9.03 4.09E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G RPL3 chr22:39708887-39716394:- 0.59 7.39 6.79E-13 Box Plot
THCA rs9621609 chr22:33347552 A/G RPS19BP1 chr22:39925098-39928860:- 0.49 8.46 3.3E-16 Box Plot
THCA rs9621609 chr22:33347552 A/G RUFY1 chr5:178977559-179037027:+ -0.49 -6.32 6.11E-10 Box Plot